STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE0213Homologs of previously reported genes of unknown function. (177 aa)    
Predicted Functional Partners:
NIDE0208
Homologs of previously reported genes of unknown function.
 
   
 0.937
NIDE0211
Conserved protein of unknown function, DUF1365; Homologs of previously reported genes of unknown function.
 
   
 0.937
NIDE0210
Putative Flavin-containing amine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.920
cfa
Cyclopropane-fatty-acyl-phospholipid synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.911
NIDE0209
Putative Glucose/ribitol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.854
NIDE0207
Homologs of previously reported genes of unknown function.
 
     0.657
NIDE4241
HAD-like hydrolase, putative purine nucleotidase; Function of strongly homologous gene; enzyme.
  
     0.600
NIDE0204
Homologs of previously reported genes of unknown function.
       0.432
NIDE0206
Protein of unknown function, CbiX domain; No homology to any previously reported sequences; 11215515, 12055304, 12686546, 12869542, 16042605, 16835730.
       0.426
NIDE0189
Conserved protein of unknown function, DUF393; Homologs of previously reported genes of unknown function.
 
     0.406
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.