STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE0214Putative large exoprotein involved in heme utilization or adhesion; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (1149 aa)    
Predicted Functional Partners:
NIDE0217
Putative Hemolysin activation/secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
 
 0.876
NIDE0216
Putative Filamentous haemagglutinin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
    
0.832
NIDE2723
Peptidase, M50 family; Function of strongly homologous gene; enzyme.
  
     0.491
NIDE1380
Homologs of previously reported genes of unknown function.
   
    0.434
NIDE1006
Conserved protein of unknown function, contains NHL repeats; Homologs of previously reported genes of unknown function; 10518528, 9868369.
  
   0.417
NIDE2724
Conserved protein of unknown function, contains GAF domain; Homologs of previously reported genes of unknown function; 12271124, 15708973, 9433123.
  
     0.414
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.