Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
NIDE0224Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (499 aa)    
Predicted Functional Partners:
NIDE0223
Signal transduction response regulator, receiver domain; Function of strongly homologous gene; regulator.
 
    0.958
cheR
Chemotaxis protein methyltransferase CheR; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     0.917
NIDE2070
Protein of unknown function, putative Response regulator with PAS domain S-box; No homology to any previously reported sequences; 14982921, 15009198, 16176121, 18076326, 7699720, 9301332, 9382818.
   
 0.900
cheR-2
Chemotaxis protein methyltransferase CheR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
      0.900
NIDE0222
Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
0.851
NIDE1123
Putative Response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
 
 0.839
NIDE3415
Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     0.806
NIDE1492
CheY-like response regulator; Function of strongly homologous gene; regulator.
    0.805
NIDE3051
CheY-like response regulator; Function of strongly homologous gene; regulator.
  
 
   0.797
NIDE1688
DNA-binding response regulator, CheY like; Function of strongly homologous gene; regulator.
  
 
   0.785
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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