| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NIDE0292 | NIDE0293 | NIDE0292 | NIDE0293 | Protein of unknown function; No homology to any previously reported sequences. | Putative DNA-binding domain protein, Excisionase family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | 0.673 |
| NIDE0292 | int | NIDE0292 | NIDE0294 | Protein of unknown function; No homology to any previously reported sequences. | Phage integrase; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family. | 0.671 |
| NIDE0293 | NIDE0292 | NIDE0293 | NIDE0292 | Putative DNA-binding domain protein, Excisionase family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | Protein of unknown function; No homology to any previously reported sequences. | 0.673 |
| NIDE0293 | hslU | NIDE0293 | NIDE0298 | Putative DNA-binding domain protein, Excisionase family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | Heat shock protein HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.419 |
| NIDE0293 | hslV | NIDE0293 | NIDE0297 | Putative DNA-binding domain protein, Excisionase family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | Heat shock protein HslUV, peptidase component; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.431 |
| NIDE0293 | int | NIDE0293 | NIDE0294 | Putative DNA-binding domain protein, Excisionase family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | Phage integrase; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family. | 0.774 |
| NIDE0293 | trmFO | NIDE0293 | NIDE0295 | Putative DNA-binding domain protein, Excisionase family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.431 |
| NIDE0293 | xerC | NIDE0293 | NIDE0296 | Putative DNA-binding domain protein, Excisionase family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.432 |
| NIDE1089 | apt | NIDE1089 | NIDE1247 | Putative Phosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.730 |
| NIDE1089 | int | NIDE1089 | NIDE0294 | Putative Phosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Phage integrase; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family. | 0.437 |
| NIDE1089 | tyrA | NIDE1089 | NIDE0422 | Putative Phosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Prephenate dehydrogenase; Function of strongly homologous gene; enzyme. | 0.760 |
| NIDE1089 | xerC | NIDE1089 | NIDE0296 | Putative Phosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.437 |
| apt | NIDE1089 | NIDE1247 | NIDE1089 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Putative Phosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.730 |
| apt | int | NIDE1247 | NIDE0294 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phage integrase; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family. | 0.434 |
| apt | tyrA | NIDE1247 | NIDE0422 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Prephenate dehydrogenase; Function of strongly homologous gene; enzyme. | 0.742 |
| apt | xerC | NIDE1247 | NIDE0296 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.434 |
| hslU | NIDE0293 | NIDE0298 | NIDE0293 | Heat shock protein HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Putative DNA-binding domain protein, Excisionase family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. | 0.419 |
| hslU | hslV | NIDE0298 | NIDE0297 | Heat shock protein HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Heat shock protein HslUV, peptidase component; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.999 |
| hslU | int | NIDE0298 | NIDE0294 | Heat shock protein HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Phage integrase; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family. | 0.475 |
| hslU | trmFO | NIDE0298 | NIDE0295 | Heat shock protein HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.855 |