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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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[Homology]
Score
NIDE0325Putative RNA-metabolising metallo-beta-lactamase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (465 aa)    
Predicted Functional Partners:
NIDE0326
Homologs of previously reported genes of unknown function; Belongs to the LOG family.
  
    0.845
NIDE1523
Protein of unknown function; No homology to any previously reported sequences; 14731533, 15335710, 1639195, 7531822, 7953536.
    
 0.833
NIDE3282
Exported protein of unknown function, contains WD40 repeats; No homology to any previously reported sequences; 1909108.
    
 0.833
rbpA
RNA-binding protein; Function of strongly homologous gene; factor.
   
 0.807
NIDE3186
RNA-binding protein (fragment); Function of strongly homologous gene; factor.
   
 0.807
NIDE3327
Putative RNA-binding protein RbpA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
   
 0.807
dmpA
Peptidase S58; Function of strongly homologous gene; enzyme.
  
    0.753
NIDE1906
Putative Metallophosphoesterase, possible DNA repair exonuclease SbcCD, subunit D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.663
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.613
NIDE0327
Exported protein of unknown function; No homology to any previously reported sequences.
       0.601
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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