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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE0495Exported protein of unknown function, contains Transglycosylase SLT domain; No homology to any previously reported sequences; 14625683, 8203016. (343 aa)    
Predicted Functional Partners:
ttuD
Putative Hydroxypyruvate reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.821
NIDE0497
Putative Phosphoenolpyruvate synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.785
NIDE0494
Putative Uracil-DNA glycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.645
NIDE0498
Putative DNA recombination protein RmuC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.
       0.514
NIDE1580
Conserved exported protein of unknown function, putative LPS-assembly protein Imp; Homologs of previously reported genes of unknown function; 12724388, 16861298, 2547691, 7811102.
  
   
 0.511
NIDE0499
Homologs of previously reported genes of unknown function.
       0.508
NIDE0500
Protein of unknown function; No homology to any previously reported sequences.
       0.504
lolC
Lipoprotein-releasing system, transmembrane protein LolC; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
     0.482
fliI
ATPase FliI; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.477
NIDE2341
Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.468
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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