Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NIDE0529Putative Dimethylargininase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (266 aa)    
Predicted Functional Partners:
NIDE0528
Homologs of previously reported genes of unknown function.
  
  0.998
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
 0.922
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
    
  0.900
pdaD
Arginine decarboxylase, pyruvoyl-dependent; Function of strongly homologous gene; enzyme.
     
  0.900
argD
Acetylornithine aminotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
  
 0.859
argH
Argininosuccinate lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.800
truD
tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
       0.611
NIDE0601
Putative tRNA-processing ribonuclease BN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.536
NIDE3131
Putative Small-conductance mechanosensitive ion channel; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
    0.435
chaA
Calcium/proton antiporter; Function of homologous gene experimentally demonstrated in an other organism; transporter.
   
    0.427
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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