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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE0633Putative Thiol-disulfide oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (177 aa)    
Predicted Functional Partners:
ccdA
Cytochrome c biogenesis protein CcdA; Function of strongly homologous gene; enzyme.
  
 0.803
NIDE0634
Exported protein of unknown function; No homology to any previously reported sequences.
       0.773
NIDE0632
Conserved exported protein of unknown function, contains BNR repeats; Homologs of previously reported genes of unknown function; 2562507.
  
    0.764
NIDE0635
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
       0.557
NIDE0631
Exported protein of unknown function; No homology to any previously reported sequences.
       0.550
resA
Thiol-disulfide oxidoreductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    
0.490
NIDE0628
Putative TonB protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.481
NIDE0636
Protein of unknown function, contains Excisionase DNA-binding domain; No homology to any previously reported sequences; 15066428.
       0.400
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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