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copA protein (Nitrospira defluvii) - STRING interaction network
"copA" - Copper-exporting ATPase in Nitrospira defluvii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copACopper-exporting ATPase; Evidence 2b - Function of strongly homologous gene; Product type t - transporter (960 aa)    
Predicted Functional Partners:
merP
Periplasmic mercury ion-binding protein; Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (MerA) via the MerT protein (94 aa)
 
 
 
  0.873
zitB
Zinc transporter ZitB; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type t - transporter (325 aa)
 
   
  0.719
NIDE0679
Uncharacterized protein; Evidence 5 - No homology to any previously reported sequences (65 aa)
              0.655
NIDE0677
Putative Disulfide oxidoreductase dsbA; Evidence 3 - Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe - putative enzyme (214 aa)
     
      0.649
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (881 aa)
   
   
  0.645
merR
Mercuric resistance operon regulatory protein; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type r - regulator (135 aa)
     
  0.607
NIDE0815
Putative Hybrid histidine kinase; Evidence 3 - Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe - putative enzyme (1431 aa)
   
 
  0.537
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (341 aa)
   
   
  0.509
nirK
Copper-containing nitrite reductase; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme (321 aa)
 
 
  0.505
NIDE2534
Putative Copper-containing nitrite reductase (NO-forming); Evidence 3 - Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e - enzyme (323 aa)
 
 
  0.495
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: C. Nitrospira defluvii, Candidatus Nitrospira defluvii, Nitrospira defluvii
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