STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE0743Protein of unknown function; No homology to any previously reported sequences. (444 aa)    
Predicted Functional Partners:
NIDE0532
Conserved protein of unknown function, putative NCAIR mutase; Homologs of previously reported genes of unknown function; 10574791.
 
  
 0.941
NIDE3731
Conserved protein of unknown function, PP-loop superfamily; Homologs of previously reported genes of unknown function; 7731953.
 
  
 0.934
NIDE0534
Conserved protein of unknown function, UPF0272; Homologs of previously reported genes of unknown function; Belongs to the LarC family.
 
  
 0.854
pykA
Pyruvate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the pyruvate kinase family.
      
 0.794
pykF
Pyruvate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the pyruvate kinase family.
      
 0.793
NIDE0741
Putative Polysaccharide biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.773
NIDE0742
Protein of unknown function, putative Glycosyltransferase; No homology to any previously reported sequences.
       0.773
NIDE0739
Glycosyl transferase, group 1; Function of strongly homologous gene; enzyme.
       0.585
NIDE0740
Putative Glycosyl transferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.585
NIDE0744
Conserved membrane protein of unknown function, putative glycosyltransferase; Homologs of previously reported genes of unknown function.
       0.566
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.