STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIDE0746Protein of unknown function; No homology to any previously reported sequences. (147 aa)    
Predicted Functional Partners:
fliS
Flagellin-specific chaperone FliS; Function of homologous gene experimentally demonstrated in an other organism; factor.
  
  
 0.780
NIDE2341
Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.753
NIDE0745
Conserved protein of unknown function, Alpha/beta hydrolase fold; Homologs of previously reported genes of unknown function.
     
 0.742
motA
Flagellar motor protein MotA; Function of homologous gene experimentally demonstrated in an other organism; structure.
  
 
 0.674
flgK
First flagellar hook-filament junction protein FlgK; Function of homologous gene experimentally demonstrated in an other organism; structure.
  
  
 0.655
cheV
Chemotaxis signal transducer CheV; Function of strongly homologous gene; regulator.
  
  
 0.628
yajQ
Conserved protein of unknown function, nucleotide-binding protein; Homologs of previously reported genes of unknown function; 12381839; Belongs to the UPF0234 family.
     
 0.572
flgM
Anti-sigma 28 factor FlgM; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  
 0.569
cheR
Chemotaxis protein methyltransferase CheR; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.565
cheR-2
Chemotaxis protein methyltransferase CheR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  
 0.565
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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