pilC protein (Nitrospira defluvii) - STRING interaction network

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Score

pilC

Type IV pilus biogenesis protein PilC; Function of strongly homologous gene; transporter. (405 aa)

Predicted Functional Partners:

pilM

0.954

gspE

0.954

gspE2

0.953

NIDE4097

0.953

pilD

0.891

pilA2

0.877

NIDE1352

0.825

pilT1

0.824

pilT2

0.810

NIDE4100

0.790

Your Current Organism:

Nitrospira defluvii

NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NIDE1352	NIDE4097	NIDE1352	NIDE4097	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	0.733
NIDE1352	gspE	NIDE1352	NIDE2825	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	General secretion pathway protein E; Function of strongly homologous gene; transporter.	0.722
NIDE1352	gspE2	NIDE1352	NIDE1508	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	General secretion pathway protein E, contains GAF domain; Function of strongly homologous gene; transporter.	0.716
NIDE1352	pilA2	NIDE1352	NIDE3439	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilin PilA; Function of homologous gene experimentally demonstrated in an other organism; structure.	0.749
NIDE1352	pilC	NIDE1352	NIDE0777	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilus biogenesis protein PilC; Function of strongly homologous gene; transporter.	0.825
NIDE1352	pilD	NIDE1352	NIDE4102	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.459
NIDE1352	pilM	NIDE1352	NIDE1348	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilus biogenesis protein PilM; Function of strongly homologous gene; structure.	0.974
NIDE1352	pilT1	NIDE1352	NIDE3448	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Twitching mobility protein PilT; Function of homologous gene experimentally demonstrated in an other organism; structure.	0.655
NIDE1352	pilT2	NIDE1352	NIDE3449	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Twitching mobility protein PilT; Function of homologous gene experimentally demonstrated in an other organism; structure.	0.619
NIDE4097	NIDE1352	NIDE4097	NIDE1352	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	0.733
NIDE4097	NIDE4100	NIDE4097	NIDE4100	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Protein of unknown function; No homology to any previously reported sequences.	0.839
NIDE4097	pilA2	NIDE4097	NIDE3439	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilin PilA; Function of homologous gene experimentally demonstrated in an other organism; structure.	0.721
NIDE4097	pilC	NIDE4097	NIDE0777	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilus biogenesis protein PilC; Function of strongly homologous gene; transporter.	0.953
NIDE4097	pilD	NIDE4097	NIDE4102	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.889
NIDE4097	pilM	NIDE4097	NIDE1348	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilus biogenesis protein PilM; Function of strongly homologous gene; structure.	0.625
NIDE4097	pilT1	NIDE4097	NIDE3448	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Twitching mobility protein PilT; Function of homologous gene experimentally demonstrated in an other organism; structure.	0.438
NIDE4100	NIDE4097	NIDE4100	NIDE4097	Protein of unknown function; No homology to any previously reported sequences.	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	0.839
NIDE4100	gspE	NIDE4100	NIDE2825	Protein of unknown function; No homology to any previously reported sequences.	General secretion pathway protein E; Function of strongly homologous gene; transporter.	0.735
NIDE4100	gspE2	NIDE4100	NIDE1508	Protein of unknown function; No homology to any previously reported sequences.	General secretion pathway protein E, contains GAF domain; Function of strongly homologous gene; transporter.	0.735
NIDE4100	pilA2	NIDE4100	NIDE3439	Protein of unknown function; No homology to any previously reported sequences.	Type IV pilin PilA; Function of homologous gene experimentally demonstrated in an other organism; structure.	0.714