Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NIDE1034ABC transporter, ATP-binding component, putative Fe3+ transport system; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily. (369 aa)    
Predicted Functional Partners:
NIDE1035
ABC transporter, permease component, putative Fe3+ transport system; Function of strongly homologous gene; transporter.
 0.994
NIDE1036
ABC transporter, periplasmic binding component, putative Fe3+ transport system; Function of strongly homologous gene; transporter.
 
 
 0.985
potB
Polyamine ABC transporter, permease protein PotB; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.949
potC
Polyamine ABC transporter, permease protein PotC; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.948
cysT
Sulfate/thiosulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
   
 0.934
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.888
cysW
Sulfate/thiosulfate ABC transporter, permease protein CysW; Function of homologous gene experimentally demonstrated in an other organism; transporter.
     0.753
potD
Polyamine ABC transporter, periplasmic-binding protein PotD; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.699
exbD-2
Biopolymer transport protein ExbD; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
  
 0.579
exbB-2
Biopolymer transport protein ExbB; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
  
 0.559
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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