STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macAEfflux transporter, RND family, MFP subunit, putative Macrolide-specific efflux protein; Function of strongly homologous gene; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (424 aa)    
Predicted Functional Partners:
macB
ABC transporter, ATPase component, putative Macrolide export ATP-binding protein; Function of strongly homologous gene; enzyme.
 
  
 0.953
macC
ABC transporter, permease component, putative Macrolide export permease protein; Function of strongly homologous gene; transporter.
  
 0.936
NIDE3944
Putative ABC-type transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.881
pal-2
Exported protein of unknown function, OmpA family; No homology to any previously reported sequences; 11173492, 16475801, 17052729, 2202726; Belongs to the Pal lipoprotein family.
      
 0.732
pal
Peptidoglycan-associated lipoprotein Pal (modular protein); Function of strongly homologous gene; lipoprotein; Belongs to the Pal lipoprotein family.
      
 0.732
NIDE0667
ABC-type transport system, permease component; Function of strongly homologous gene; transporter.
 
     0.553
NIDE1685
Putative Outer membrane protein TolC precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
   0.497
NIDE1802
Putative Outer membrane protein TolC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
   0.495
NIDE3198
Putative Outer membrane efflux protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
   0.463
NIDE1803
Putative Acriflavine resistance protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.454
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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