Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cynSCyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (146 aa)    
Predicted Functional Partners:
nirA
Ferredoxin-nitrite reductase; Function of strongly homologous gene; enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.925
nirC
Nitrite transporter; Function of strongly homologous gene; transporter.
 
   
 0.924
cah
Carbonic anhydrase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
cam
Carbonic anhydrase; Function of strongly homologous gene; enzyme.
     
  0.900
cam2
Carbonic anhydrase; Function of strongly homologous gene; enzyme.
     
  0.900
amtB
Ammonium transporter Amt; Function of homologous gene experimentally demonstrated in an other organism; transporter.
     
 0.837
focA
Formate transporter; Function of strongly homologous gene; transporter.
 
   
 0.811
glnA
Glutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.760
nirK
Copper-containing nitrite reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.754
speB
Agmatinase; Function of strongly homologous gene; enzyme; Belongs to the arginase family.
      
 0.750
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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