NIDE1502 protein (Nitrospira defluvii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

NIDE1502

Homologs of previously reported genes of unknown function. (110 aa)

Predicted Functional Partners:

NIDE1501

0.610

NIDE1503

0.497

NIDE1504

0.497

NIDE1505

0.410

Your Current Organism:

Nitrospira defluvii

NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
NIDE1501	NIDE1502	Protein of unknown function; No homology to any previously reported sequences.	Homologs of previously reported genes of unknown function.	0.610
NIDE1501	NIDE1503	Protein of unknown function; No homology to any previously reported sequences.	Putative ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.405
NIDE1501	NIDE1504	Protein of unknown function; No homology to any previously reported sequences.	Putative ABC transporter, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.405
NIDE1502	NIDE1501	Homologs of previously reported genes of unknown function.	Protein of unknown function; No homology to any previously reported sequences.	0.610
NIDE1502	NIDE1503	Homologs of previously reported genes of unknown function.	Putative ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.497
NIDE1502	NIDE1504	Homologs of previously reported genes of unknown function.	Putative ABC transporter, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.497
NIDE1502	NIDE1505	Homologs of previously reported genes of unknown function.	Conserved protein of unknown function, putative ABC transporter, periplasmic binding component; Homologs of previously reported genes of unknown function.	0.410
NIDE1503	NIDE1501	Putative ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Protein of unknown function; No homology to any previously reported sequences.	0.405
NIDE1503	NIDE1502	Putative ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Homologs of previously reported genes of unknown function.	0.497
NIDE1503	NIDE1504	Putative ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative ABC transporter, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.996
NIDE1503	NIDE1505	Putative ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Conserved protein of unknown function, putative ABC transporter, periplasmic binding component; Homologs of previously reported genes of unknown function.	0.994
NIDE1504	NIDE1501	Putative ABC transporter, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Protein of unknown function; No homology to any previously reported sequences.	0.405
NIDE1504	NIDE1502	Putative ABC transporter, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Homologs of previously reported genes of unknown function.	0.497
NIDE1504	NIDE1503	Putative ABC transporter, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.996
NIDE1504	NIDE1505	Putative ABC transporter, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Conserved protein of unknown function, putative ABC transporter, periplasmic binding component; Homologs of previously reported genes of unknown function.	0.985
NIDE1505	NIDE1502	Conserved protein of unknown function, putative ABC transporter, periplasmic binding component; Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.410
NIDE1505	NIDE1503	Conserved protein of unknown function, putative ABC transporter, periplasmic binding component; Homologs of previously reported genes of unknown function.	Putative ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.994
NIDE1505	NIDE1504	Conserved protein of unknown function, putative ABC transporter, periplasmic binding component; Homologs of previously reported genes of unknown function.	Putative ABC transporter, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.985