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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE1636Exported protein of unknown function; No homology to any previously reported sequences. (443 aa)    
Predicted Functional Partners:
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.836
NIDE1637
Exported protein of unknown function; No homology to any previously reported sequences.
       0.825
ppdK
Pyruvate, phosphate dikinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the PEP-utilizing enzyme family.
       0.789
NIDE1638
Conserved protein of unknown function, putative Methyltransferase; Homologs of previously reported genes of unknown function.
       0.737
NIDE1633
Protein of unknown function; No homology to any previously reported sequences.
       0.691
glyS
Glycyl-tRNA synthetase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.661
NIDE1639
Putative Multidrug resistance protein MdtG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.639
glyQ
Glycyl-tRNA synthetase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.580
ribE
Riboflavin synthase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.522
NIDE3313
Exported protein of unknown function, putative Multicopper oxidase; No homology to any previously reported sequences.
  
     0.507
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.