STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE1638Conserved protein of unknown function, putative Methyltransferase; Homologs of previously reported genes of unknown function. (199 aa)    
Predicted Functional Partners:
ppdK
Pyruvate, phosphate dikinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the PEP-utilizing enzyme family.
     
 0.751
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.746
NIDE1636
Exported protein of unknown function; No homology to any previously reported sequences.
       0.737
NIDE1637
Exported protein of unknown function; No homology to any previously reported sequences.
       0.737
NIDE1633
Protein of unknown function; No homology to any previously reported sequences.
       0.657
glyS
Glycyl-tRNA synthetase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.627
NIDE1639
Putative Multidrug resistance protein MdtG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.547
glyQ
Glycyl-tRNA synthetase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.528
ribE
Riboflavin synthase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.426
NIDE1640
Protein of unknown function; No homology to any previously reported sequences.
       0.424
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.