Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIDE1664Exported protein of unknown function, contains TPR repeats; No homology to any previously reported sequences; 15491159, 1882418, 7667876, 8514798, 9482716. (531 aa)    
Predicted Functional Partners:
NIDE1663
Exported protein of unknown function; No homology to any previously reported sequences.
       0.773
NIDE1507
Protein of unknown function, TPR-like; No homology to any previously reported sequences.
  
     0.721
NIDE1751
Protein of unknown function, TPR-like; No homology to any previously reported sequences; 14659697, 1882418, 7667876, 9482716.
  
     0.721
NIDE1530
Protein of unknown function, putative protein kinase; No homology to any previously reported sequences; 10627033, 1239947, 12406230, 1835671, 3291115, 7774814, 8733241, 9044280, 9119030.
 
 
    0.714
NIDE3282
Exported protein of unknown function, contains WD40 repeats; No homology to any previously reported sequences; 1909108.
  
 
  0.657
NIDE1961
Conserved exported protein of unknown function, TPR-like; Homologs of previously reported genes of unknown function; 14659697, 15451670, 7667876, 9482716.
  
  
 
0.538
NIDE3177
Protein of unknown function, contains DnaJ domain; No homology to any previously reported sequences; 12454054, 15170475, 8016869, 9644977.
    
 0.509
NIDE3134
Protein of unknown function, TPR-like; No homology to any previously reported sequences; 15451670, 7667876, 9482716.
  
   0.502
NIDE2030
Conserved protein of unknown function, TPR-like; Homologs of previously reported genes of unknown function; 1882418, 7667876, 9482716.
  
     0.493
NIDE3662
Protein of unknown function, TPR-like; No homology to any previously reported sequences; 1882418, 7667876, 9482716.
  
     0.483
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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