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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE1714Protein of unknown function, Rhs family; No homology to any previously reported sequences; 7934896. (623 aa)    
Predicted Functional Partners:
NIDE1717
Protein of unknown function, Rhs family; No homology to any previously reported sequences; 7934896.
    
0.953
NIDE1715
Protein of unknown function, Rhs family; No homology to any previously reported sequences; 7934896.
    
0.902
NIDE1716
Homologs of previously reported genes of unknown function.
       0.689
NIDE2025
Putative Serine/threonine protein kinase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.597
NIDE1713
Protein of unknown function; No homology to any previously reported sequences.
       0.524
NIDE2011
Homologs of previously reported genes of unknown function.
  
  
 0.470
NIDE0431
Exported protein of unknown function, contains FG-GAP repeats; No homology to any previously reported sequences; 12361595, 14689578.
 
  
 0.461
NIDE3958
Homologs of previously reported genes of unknown function.
   
    0.446
NIDE1987
Conserved protein of unknown function, Rhs element Vgr protein family; Homologs of previously reported genes of unknown function; 16763151, 9696756, 19284603.
  
 0.428
NIDE2157
Thioesterase, type II; Function of strongly homologous gene; enzyme.
  
    0.412
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.