close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE1983Conserved protein of unknown function, COG3519; Homologs of previously reported genes of unknown function; 16763151, 19284603. (604 aa)    
Predicted Functional Partners:
NIDE1984
Conserved protein of unknown function, COG3520; Homologs of previously reported genes of unknown function; 16763151, 19284603.
  
 0.988
NIDE2011
Homologs of previously reported genes of unknown function.
 
  
 0.988
NIDE1982
Conserved protein of unknown function, COG3518; Homologs of previously reported genes of unknown function; 3520236, 19284603.
 
  
 0.976
NIDE1971
Conserved protein of unknown function, COG3522; Homologs of previously reported genes of unknown function.
 
 
 0.974
clpV1
Type VI secretion ATPase, ClpV1 family; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ClpA/ClpB family.
 
  
 0.945
NIDE1975
Conserved protein of unknown function, ImpE/SciE-like; Homologs of previously reported genes of unknown function; 12580282.
 
    0.941
NIDE1972
Conserved protein of unknown function, COG3455; Homologs of previously reported genes of unknown function.
 
  
 0.934
NIDE1987
Conserved protein of unknown function, Rhs element Vgr protein family; Homologs of previously reported genes of unknown function; 16763151, 9696756, 19284603.
 
  
 0.926
NIDE1978
Conserved protein of unknown function, COG3517; Homologs of previously reported genes of unknown function; 16763151, 8573354, 19284603.
 
  
 0.919
NIDE1977
Conserved protein of unknown function, COG3516; Homologs of previously reported genes of unknown function; 12580282, 16763151.
 
  
 0.901
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.