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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2124Conserved protein of unknown function, contains CBS domain pair; Homologs of previously reported genes of unknown function; 9020585. (153 aa)    
Predicted Functional Partners:
NIDE3802
Conserved protein of unknown function, contains CBS domain pair; Homologs of previously reported genes of unknown function; 15326606, 9020585.
 
     0.769
NIDE3782
Conserved protein of unknown function, contains CBS domain pair; Homologs of previously reported genes of unknown function; 15326606, 9020585.
  
     0.764
NIDE1368
Protein of unknown function, contains CBS domains; No homology to any previously reported sequences; 14722619, 15326606, 9020585.
  
     0.549
NIDE2125
Protein of unknown function; No homology to any previously reported sequences.
       0.520
NIDE2123
Putative Transposase, ISSod13; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
       0.466
NIDE2438
Conserved protein of unknown function, contains CBS domain pair; Homologs of previously reported genes of unknown function; 15326606, 9020585.
  
     0.466
NIDE3231
Protein of unknown function, contains CBS domain pair; No homology to any previously reported sequences; 15326606, 9020585.
 
     0.466
NIDE4144
Conserved protein of unknown function, contains CBS domain pair; Homologs of previously reported genes of unknown function; 15326606, 9020585.
  
     0.463
NIDE3787
Conserved protein of unknown function, contains CBS domain pairs; Homologs of previously reported genes of unknown function; 15326606, 9020585.
  
     0.423
NIDE3783
Conserved protein of unknown function, contains CBS domain pair; Homologs of previously reported genes of unknown function; 15326606, 9020585.
  
     0.410
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.