Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2134Transposase, IS3/IS911 family; Function of strongly homologous gene; extrachromosomal origin. (87 aa)    
Predicted Functional Partners:
NIDE2133
Transposase; Function of strongly homologous gene; extrachromosomal origin.
     0.933
NIDE3762
Transposase; Function of strongly homologous gene; extrachromosomal origin.
     0.779
NIDE2713
Transposase, IS3/IS911 family; Function of strongly homologous gene; extrachromosomal origin.
  
     0.774
NIDE0913
Transposase (N-terminal fragment); Function of strongly homologous gene; enzyme.
  
     0.763
NIDE0914
Transposase (C-terminal fragment); Function of strongly homologous gene; enzyme.
 
     0.687
NIDE2705
Transposase (fragment); Function of strongly homologous gene; extrachromosomal origin.
  
     0.645
NIDE1613
Transposase (N-terminal fragment); Function of strongly homologous gene; enzyme.
  
     0.594
NIDE2706
Transposase (fragment); Function of strongly homologous gene; enzyme.
 
     0.578
NIDE2135
Putative Transposase related protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
       0.560
NIDE2136
Putative Transposase related protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
       0.559
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.