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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2222Homologs of previously reported genes of unknown function. (252 aa)    
Predicted Functional Partners:
NIDE2220
Conserved protein of unknown function CHP02241, phage tail region protein; Homologs of previously reported genes of unknown function.
       0.773
NIDE2221
Homologs of previously reported genes of unknown function.
       0.773
NIDE2223
Homologs of previously reported genes of unknown function.
       0.773
NIDE2224
Putative ATPase, AAA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
NIDE2225
Homologs of previously reported genes of unknown function.
       0.773
NIDE2226
Protein of unknown function; No homology to any previously reported sequences.
       0.773
NIDE2227
Protein of unknown function; No homology to any previously reported sequences.
       0.773
NIDE2228
Protein of unknown function; No homology to any previously reported sequences.
       0.773
NIDE2219
Putative Phage tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
       0.746
NIDE2218
Homologs of previously reported genes of unknown function.
       0.666
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.