NIDE2250 protein (Nitrospira defluvii) - STRING interaction network

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

NIDE2250

Protein of unknown function; No homology to any previously reported sequences. (56 aa)

Predicted Functional Partners:

NIDE2251

0.551

NIDE2249

0.456

NIDE2246

0.406

dnaE

0.406

NIDE2248

0.406

Your Current Organism:

Nitrospira defluvii

NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NIDE2246	NIDE2248	NIDE2246	NIDE2248	Homologs of previously reported genes of unknown function.	Putative DNA polymerase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.789
NIDE2246	NIDE2249	NIDE2246	NIDE2249	Homologs of previously reported genes of unknown function.	Putative Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response).	0.698
NIDE2246	NIDE2250	NIDE2246	NIDE2250	Homologs of previously reported genes of unknown function.	Protein of unknown function; No homology to any previously reported sequences.	0.406
NIDE2246	dnaE	NIDE2246	NIDE2247	Homologs of previously reported genes of unknown function.	DNA polymerase III, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.789
NIDE2248	NIDE2246	NIDE2248	NIDE2246	Putative DNA polymerase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.789
NIDE2248	NIDE2249	NIDE2248	NIDE2249	Putative DNA polymerase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response).	0.884
NIDE2248	NIDE2250	NIDE2248	NIDE2250	Putative DNA polymerase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function; No homology to any previously reported sequences.	0.406
NIDE2248	dnaE	NIDE2248	NIDE2247	Putative DNA polymerase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	DNA polymerase III, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.918
NIDE2249	NIDE2246	NIDE2249	NIDE2246	Putative Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response).	Homologs of previously reported genes of unknown function.	0.698
NIDE2249	NIDE2248	NIDE2249	NIDE2248	Putative Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response).	Putative DNA polymerase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.884
NIDE2249	NIDE2250	NIDE2249	NIDE2250	Putative Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response).	Protein of unknown function; No homology to any previously reported sequences.	0.456
NIDE2249	dnaE	NIDE2249	NIDE2247	Putative Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response).	DNA polymerase III, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.731
NIDE2250	NIDE2246	NIDE2250	NIDE2246	Protein of unknown function; No homology to any previously reported sequences.	Homologs of previously reported genes of unknown function.	0.406
NIDE2250	NIDE2248	NIDE2250	NIDE2248	Protein of unknown function; No homology to any previously reported sequences.	Putative DNA polymerase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.406
NIDE2250	NIDE2249	NIDE2250	NIDE2249	Protein of unknown function; No homology to any previously reported sequences.	Putative Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response).	0.456
NIDE2250	NIDE2251	NIDE2250	NIDE2251	Protein of unknown function; No homology to any previously reported sequences.	Protein of unknown function; No homology to any previously reported sequences.	0.551
NIDE2250	dnaE	NIDE2250	NIDE2247	Protein of unknown function; No homology to any previously reported sequences.	DNA polymerase III, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.406
NIDE2251	NIDE2250	NIDE2251	NIDE2250	Protein of unknown function; No homology to any previously reported sequences.	Protein of unknown function; No homology to any previously reported sequences.	0.551
dnaE	NIDE2246	NIDE2247	NIDE2246	DNA polymerase III, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	Homologs of previously reported genes of unknown function.	0.789
dnaE	NIDE2248	NIDE2247	NIDE2248	DNA polymerase III, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	Putative DNA polymerase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.918