Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
flgDFlagellar hook capping protein FlgD (fragment); Function of homologous gene experimentally demonstrated in an other organism; structure. (101 aa)    
Predicted Functional Partners:
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.996
fliE
Flagellar hook-basal body complex protein FliE; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
 
 0.994
flgE
Flagellar hook protein FlgE; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
 
 0.991
flgG
Flagellar basal-body rod protein FlgG; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
 
 0.991
fliN
Flagellar motor switch protein FliN; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.989
flgC
Flagellar basal-body rod protein FlgC; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family.
 
 
 0.988
flhB
Flagellar biosynthetic protein FlhB, export component; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
 
  
 0.978
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.976
flgI
Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.976
flgK
First flagellar hook-filament junction protein FlgK; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.974
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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