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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2320Putative Second flagellar hook-filament junction protein FlgL; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (296 aa)    
Predicted Functional Partners:
flgK
First flagellar hook-filament junction protein FlgK; Function of homologous gene experimentally demonstrated in an other organism; structure.
  
 0.991
fliS
Flagellin-specific chaperone FliS; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
 
 0.990
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
 
 0.982
NIDE2341
Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.960
flgC
Flagellar basal-body rod protein FlgC; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family.
 
  
 0.952
flgE
Flagellar hook protein FlgE; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.951
fliN
Flagellar motor switch protein FliN; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
 
 0.951
fliI
ATPase FliI; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.948
fliG
Flagellar motor switch protein FliG; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.946
flgF
Flagellar basal-body rod protein FlgF; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
 
 0.944
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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