STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NIDE2337Putative Glycosyl transferase, family 9; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (558 aa)    
Predicted Functional Partners:
NIDE2336
Homologs of previously reported genes of unknown function.
 
   0.879
nuoCD
NADH-quinone oxidoreductase, subunits C and D; Function of homologous gene experimentally demonstrated in an other organism; enzyme; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
 
 0.834
NIDE2335
Putative Glycosyltransferase, family 9; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    
0.807
NIDE2334
Protein of unknown function, putative Glycosyl transferase; No homology to any previously reported sequences; 9334165.
  
  
 0.794
rfaEa
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE; Function of strongly homologous gene; enzyme.
 
   
 0.785
rfaEb
D-beta-D-heptose 1-phosphate adenosyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
 
   
 0.779
NIDE2397
Putative ADP-heptose-LPS heptosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.771
NIDE3291
Putative Glycosyl transferase, family 9; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.770
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
 
   
 0.726
NIDE2338
Protein of unknown function; No homology to any previously reported sequences.
       0.698
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.