Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
motAFlagellar motor protein MotA; Function of homologous gene experimentally demonstrated in an other organism; structure. (256 aa)    
Predicted Functional Partners:
motB
Flagellar motor protein MotB; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
 0.998
fliG
Flagellar motor switch protein FliG; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.984
flgC
Flagellar basal-body rod protein FlgC; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family.
 
  
 0.983
flgK
First flagellar hook-filament junction protein FlgK; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.983
fliP
Flagellar biosynthetic protein FliP, export component; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.982
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.980
NIDE0237
Exported protein of unknown function; No homology to any previously reported sequences; 16475801, 2202726.
 
 
 0.979
fliQ
Flagellar biosynthetic protein FliQ, export component; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.979
NIDE0266
Putative Outer membrane protein, OmpA/MotB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 
 0.971
NIDE0265
Putative Outer membrane protein, OmpA/MotB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 
 0.970
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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