STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2392Putative Methyltransferase, FkbM family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (249 aa)    
Predicted Functional Partners:
NIDE2986
Putative Undecaprenyl-phosphate glucose phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.705
NIDE2390
Membrane protein of unknown function; No homology to any previously reported sequences.
  
  
 0.644
NIDE2391
Putative Glycosyl transferase, family 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.618
NIDE2388
Homologs of previously reported genes of unknown function.
       0.615
NIDE2389
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.615
NIDE2393
Protein of unknown function, putative Methyltransferase; No homology to any previously reported sequences.
       0.599
NIDE2394
Putative Glycosyl transferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.580
manC/pmi
Bifunctional Mannose-1-phosphate guanylyltransferase/Mannose-6-phosphate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.555
NIDE2396
Putative Glycosyl transferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.549
NIDE3926
Protein of unknown function, putative Transmembrane receptor with CHASE3 domain; No homology to any previously reported sequences.
  
     0.489
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.