STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2514Putative Sugar transporter of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (414 aa)    
Predicted Functional Partners:
NIDE1036
ABC transporter, periplasmic binding component, putative Fe3+ transport system; Function of strongly homologous gene; transporter.
  
  
 0.663
NIDE1155
Major facilitator superfamily transporter; Function of strongly homologous gene; transporter.
  
  
 0.622
mazF2
Toxin MazF; Toxic component of a type II toxin-antitoxin (TA) system.
       0.504
NIDE2513
Conserved protein of unknown function, putative CopG-like transcriptional regulator; Homologs of previously reported genes of unknown function; 9714164, 9857196.
       0.504
NIDE4167
Rieske iron-sulphur protein; Function of strongly homologous gene; carrier.
 
   
 0.488
NIDE1185
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.462
NIDE1742
Putative Multi-domain non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.450
pheA
P-protein, bifunctional chorismate mutase/prephenate dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.445
narK
Nitrate transporter; Function of strongly homologous gene; transporter.
 
  
 0.433
NIDE2511
MFS family transporter (fragment); Function of strongly homologous gene; transporter.
      
0.433
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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