Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2515Exported protein of unknown function; No homology to any previously reported sequences; 8866482. (1137 aa)    
Predicted Functional Partners:
pepP
Xaa-Pro aminopeptidase; Function of strongly homologous gene; enzyme; Belongs to the peptidase M24B family.
       0.618
NIDE2518
Homologs of previously reported genes of unknown function.
 
     0.587
NIDE0491
Homologs of previously reported genes of unknown function.
  
     0.571
NIDE1222
Sensor histidine kinase; Function of strongly homologous gene; enzyme.
  
     0.563
sdhB
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
    0.480
NIDE1580
Conserved exported protein of unknown function, putative LPS-assembly protein Imp; Homologs of previously reported genes of unknown function; 12724388, 16861298, 2547691, 7811102.
  
     0.435
NIDE0540
Putative Outer membrane lipoprotein carrier protein LolA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
     0.427
NIDE2514
Putative Sugar transporter of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.424
NIDE3436
Homologs of previously reported genes of unknown function.
  
     0.418
NIDE4094
Putative Type IV pilus assembly protein PilW; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
     0.417
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.