Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NIDE2652Putative CheW-like signal transduction protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (158 aa)    
Predicted Functional Partners:
NIDE2654
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.945
NIDE2655
Putative Methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
 
 0.880
NIDE2651
Putative Response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.800
cheA
Chemotaxis protein histidine kinase CheA; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.780
cheA-2
Chemotaxis protein histidine kinase CheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
 
 0.780
fliS
Flagellin-specific chaperone FliS; Function of homologous gene experimentally demonstrated in an other organism; factor.
  
  
 0.757
motA
Flagellar motor protein MotA; Function of homologous gene experimentally demonstrated in an other organism; structure.
  
  
 0.756
NIDE2653
Protein of unknown function, CheW-like; No homology to any previously reported sequences; 12511501, 16622408, 9989504.
       0.754
NIDE2341
Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.733
NIDE2349
Putative Chemotaxis regulator CheZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
  
 0.729
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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