STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
NIDE2686Putative Flavin reductase-like protein, contains FMN-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (159 aa)    
Predicted Functional Partners:
NIDE2693
Putative Alkanesulfonate monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.692
NIDE2687
Protein of unknown function, putative N-acetyltransferase; No homology to any previously reported sequences; 15581578, 9175471.
  
    0.661
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.614
NIDE2688
Homologs of previously reported genes of unknown function.
       0.520
NIDE2689
Conserved protein of unknown function, putative Hexapeptide repeat transferase; Homologs of previously reported genes of unknown function; 7481807, 8293817.
     
 0.451
NIDE2684
Protein of unknown function DUF218; No homology to any previously reported sequences.
     
 0.433
NIDE2690
Protein of unknown function, putative Methyltransferase; No homology to any previously reported sequences.
     
 0.415
NIDE2685
Putative UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
       0.414
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.