Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NIDE2688Homologs of previously reported genes of unknown function. (371 aa)    
Predicted Functional Partners:
NIDE2689
Conserved protein of unknown function, putative Hexapeptide repeat transferase; Homologs of previously reported genes of unknown function; 7481807, 8293817.
 
    0.673
NIDE2687
Protein of unknown function, putative N-acetyltransferase; No homology to any previously reported sequences; 15581578, 9175471.
       0.605
NIDE2690
Protein of unknown function, putative Methyltransferase; No homology to any previously reported sequences.
       0.589
NIDE2691
Putative D-alanine-poly(phosphoribitol) ligase, subunit 2 (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.573
NIDE2692
Putative D-alanine-poly(phosphoribitol) ligase, subunit 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the ATP-dependent AMP-binding enzyme family.
       0.573
NIDE2700
Putative Phosphatidylinositol alpha-mannosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.558
NIDE2697
Putative Capsular polysaccharide biosynthesis glycosyltransferase CapM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.540
NIDE2686
Putative Flavin reductase-like protein, contains FMN-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.520
capD2
Polysaccharide biosynthesis protein CapD; Function of strongly homologous gene; enzyme.
 
     0.494
NIDE2694
Exopolysaccharide production protein; Function of strongly homologous gene; enzyme.
     0.482
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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