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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2698Conserved protein of unknown function, putative Polysaccharide deacetylase; Homologs of previously reported genes of unknown function. (335 aa)    
Predicted Functional Partners:
NIDE2700
Putative Phosphatidylinositol alpha-mannosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.799
asnB
Asparagine synthetase, glutamine-hydrolyzing; Function of strongly homologous gene; enzyme.
       0.781
NIDE2697
Putative Capsular polysaccharide biosynthesis glycosyltransferase CapM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.706
NIDE2695
Protein of unknown function; No homology to any previously reported sequences.
 
   
 0.669
NIDE2694
Exopolysaccharide production protein; Function of strongly homologous gene; enzyme.
       0.641
NIDE2696
Protein of unknown function; No homology to any previously reported sequences.
       0.620
NIDE0883
Putative Succinoglycan biosynthesis protein ExoA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.577
NIDE2864
Glycosyl transferase, group 2; Function of strongly homologous gene; enzyme.
  
  
 0.577
NIDE2689
Conserved protein of unknown function, putative Hexapeptide repeat transferase; Homologs of previously reported genes of unknown function; 7481807, 8293817.
 
     0.411
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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