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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2705Transposase (fragment); Function of strongly homologous gene; extrachromosomal origin. (81 aa)    
Predicted Functional Partners:
NIDE2706
Transposase (fragment); Function of strongly homologous gene; enzyme.
     0.960
NIDE0913
Transposase (N-terminal fragment); Function of strongly homologous gene; enzyme.
  
     0.775
NIDE2704
Glycosyl transferase, group 1; Function of strongly homologous gene; enzyme.
  
    0.684
NIDE0912
Transposase, IS3 family; Function of strongly homologous gene; enzyme.
 
     0.675
NIDE2134
Transposase, IS3/IS911 family; Function of strongly homologous gene; extrachromosomal origin.
  
     0.645
NIDE2713
Transposase, IS3/IS911 family; Function of strongly homologous gene; extrachromosomal origin.
 
     0.585
NIDE2703
Putative Lipopolysaccharide core biosynthesis glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.410
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.