NIDE2971 protein (Nitrospira defluvii) - STRING interaction network

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[Homology]

Score

NIDE2971

Homologs of previously reported genes of unknown function. (177 aa)

Predicted Functional Partners:

cysS

0.802

NIDE1675

0.706

NIDE4104

0.706

NIDE2972

0.583

truA

0.526

Your Current Organism:

Nitrospira defluvii

NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NIDE1675	NIDE2971	NIDE1675	NIDE2971	Putative 23S rRNA methyltransferase RlmB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Homologs of previously reported genes of unknown function.	0.706
NIDE1675	cysS	NIDE1675	NIDE4105	Putative 23S rRNA methyltransferase RlmB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Cysteinyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.605
NIDE1675	truA	NIDE1675	NIDE2973	Putative 23S rRNA methyltransferase RlmB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.406
NIDE2971	NIDE1675	NIDE2971	NIDE1675	Homologs of previously reported genes of unknown function.	Putative 23S rRNA methyltransferase RlmB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.706
NIDE2971	NIDE2972	NIDE2971	NIDE2972	Homologs of previously reported genes of unknown function.	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.583
NIDE2971	NIDE4104	NIDE2971	NIDE4104	Homologs of previously reported genes of unknown function.	RNA methyltransferase, TrmH family, group 3; Function of strongly homologous gene; enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.706
NIDE2971	cysS	NIDE2971	NIDE4105	Homologs of previously reported genes of unknown function.	Cysteinyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.802
NIDE2971	truA	NIDE2971	NIDE2973	Homologs of previously reported genes of unknown function.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.526
NIDE2972	NIDE2971	NIDE2972	NIDE2971	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.583
NIDE2972	truA	NIDE2972	NIDE2973	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.715
NIDE4104	NIDE2971	NIDE4104	NIDE2971	RNA methyltransferase, TrmH family, group 3; Function of strongly homologous gene; enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Homologs of previously reported genes of unknown function.	0.706
NIDE4104	cysS	NIDE4104	NIDE4105	RNA methyltransferase, TrmH family, group 3; Function of strongly homologous gene; enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Cysteinyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.921
NIDE4104	truA	NIDE4104	NIDE2973	RNA methyltransferase, TrmH family, group 3; Function of strongly homologous gene; enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.402
cysS	NIDE1675	NIDE4105	NIDE1675	Cysteinyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.	Putative 23S rRNA methyltransferase RlmB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.605
cysS	NIDE2971	NIDE4105	NIDE2971	Cysteinyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.	Homologs of previously reported genes of unknown function.	0.802
cysS	NIDE4104	NIDE4105	NIDE4104	Cysteinyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.	RNA methyltransferase, TrmH family, group 3; Function of strongly homologous gene; enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.921
truA	NIDE1675	NIDE2973	NIDE1675	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	Putative 23S rRNA methyltransferase RlmB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.406
truA	NIDE2971	NIDE2973	NIDE2971	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	Homologs of previously reported genes of unknown function.	0.526
truA	NIDE2972	NIDE2973	NIDE2972	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.715
truA	NIDE4104	NIDE2973	NIDE4104	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	RNA methyltransferase, TrmH family, group 3; Function of strongly homologous gene; enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.402