Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIDE2990Conserved protein of unknown function, putative Methyltransferase; Homologs of previously reported genes of unknown function. (259 aa)    
Predicted Functional Partners:
pmtA
Phosphatidylethanolamine N-methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.698
NIDE2992
Protein of unknown function, putative Methyltransferase; No homology to any previously reported sequences.
 
 
   0.676
NIDE2989
Putative Glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.668
NIDE2988
Putative Glycosyl transferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.536
NIDE2991
Conserved protein of unknown function, putative Glycosyltransferase; Homologs of previously reported genes of unknown function.
       0.493
NIDE2993
Putative Glycosyl transferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.493
NIDE2995
Putative Asparagine synthetase (glutamine-hydrolyzing); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.481
NIDE2994
Putative Exopolysaccharide production protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.472
NIDE3680
Putative Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.415
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.