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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsECell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (222 aa)    
Predicted Functional Partners:
NIDE3066
Putative Cell division protein FtsX; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 0.996
NIDE3065
Putative Murein hydrolase EnvC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.
 
   
 0.932
macC
ABC transporter, permease component, putative Macrolide export permease protein; Function of strongly homologous gene; transporter.
    
 0.901
NIDE3944
Putative ABC-type transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
 0.901
ctpA
C-terminal-processing protease precursor; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S41A family.
       0.747
drrA
Daunorubicin resistance ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
 
    
0.738
NIDE3068
Conserved protein of unknown function, UPF0102; Homologs of previously reported genes of unknown function; Belongs to the UPF0102 family.
     
 0.667
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.625
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.604
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
   
 0.575
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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