node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NIDE1291 | cinA | NIDE1291 | NIDE3079 | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family. | 0.484 |
NIDE1291 | dnaB | NIDE1291 | NIDE3441 | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.517 |
NIDE1291 | dnaB-2 | NIDE1291 | NIDE4231 | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.534 |
NIDE1291 | recA | NIDE1291 | NIDE1705 | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.901 |
NIDE1291 | uvrA | NIDE1291 | NIDE0568 | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | Excinuclease ABC, subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.425 |
NIDE1291 | uvrA-2 | NIDE1291 | NIDE3216 | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | Excinuclease ABC, subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.425 |
NIDE1291 | uvrB | NIDE1291 | NIDE3077 | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | Excinuclease ABC, subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.899 |
NIDE1291 | uvrC | NIDE1291 | NIDE0595 | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.742 |
NIDE3078 | cinA | NIDE3078 | NIDE3079 | Putative 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family. | 0.889 |
NIDE3078 | uvrB | NIDE3078 | NIDE3077 | Putative 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Excinuclease ABC, subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.539 |
cinA | NIDE1291 | NIDE3079 | NIDE1291 | CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family. | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | 0.484 |
cinA | NIDE3078 | NIDE3079 | NIDE3078 | CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family. | Putative 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.889 |
cinA | recA | NIDE3079 | NIDE1705 | CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.697 |
cinA | uvrB | NIDE3079 | NIDE3077 | CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family. | Excinuclease ABC, subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.708 |
cinA | uvrC | NIDE3079 | NIDE0595 | CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.513 |
dnaB | NIDE1291 | NIDE3441 | NIDE1291 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | 0.517 |
dnaB | dnaB-2 | NIDE3441 | NIDE4231 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.904 |
dnaB | recG | NIDE3441 | NIDE1408 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | ATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.850 |
dnaB | uvrB | NIDE3441 | NIDE3077 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Excinuclease ABC, subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.789 |
dnaB-2 | NIDE1291 | NIDE4231 | NIDE1291 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | ATP-dependent DNA helicase; Function of strongly homologous gene; enzyme. | 0.534 |