Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mopMolybdenum-pterin-binding protein; Function of strongly homologous gene; putative regulator. (67 aa)    
Predicted Functional Partners:
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.678
modA
Molybdate ABC transporter, periplasmic binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
     
 0.647
NIDE3153
Putative Anion-selective porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.588
modC
Molybdate ABC transporter, ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ABC transporter superfamily.
       0.586
NIDE3151
Exported protein of unknown function; No homology to any previously reported sequences.
       0.576
NIDE3155
Putative Molybdate ABC transporter, periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
 0.534
NIDE3156
Putative Transcriptional regulator ModE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.481
flgD
Flagellar hook capping protein FlgD (fragment); Function of homologous gene experimentally demonstrated in an other organism; structure.
   
   0.472
modA3
Molybdenum ABC transporter, periplasmic binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
   
 0.453
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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