Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3221Protein of unknown function, NrfA-like; No homology to any previously reported sequences; 10841552, 11929995, 11938352, 8039676, 8057835, 8816789, 9927663. (424 aa)    
Predicted Functional Partners:
NIDE3222
Putative Deacetylase, histone deacetylase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
NIDE3220
Putative 3-mercaptopyruvate sulfurtransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.711
nxrA1
Putative Nitrate oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.586
nxrA2
Putative Nitrate oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.586
napG
Ferredoxin-type protein NapG; Function of strongly homologous gene; enzyme.
 
  
 0.572
NIDE3224
Conserved protein of unknown function, TPR-like; Homologs of previously reported genes of unknown function; 1882418, 7667876, 9482716.
       0.500
smbP
Metal-binding protein SmbP; Function of homologous gene experimentally demonstrated in an other organism; factor.
       0.498
NIDE2245
Membrane protein of unknown function, putative 4Fe-4S ferredoxin; No homology to any previously reported sequences; 2600971, 3932661.
  
 
 0.483
NIDE3279
Protein of unknown function, putative Chaperone protein; No homology to any previously reported sequences; 12957948, 16030201.
 
  
 0.478
NIDE3153
Putative Anion-selective porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.468
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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