STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3268Exported protein of unknown function; No homology to any previously reported sequences; 15802249, 16322447, 16756481. (412 aa)    
Predicted Functional Partners:
NIDE3269
Protein of unknown function; No homology to any previously reported sequences.
 
    
0.747
NIDE3271
Putative Nitrate oxidoreductase, gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.615
NIDE3270
Protein of unknown function; No homology to any previously reported sequences; 9041651, 9204764, 9382826.
       0.588
NIDE3153
Putative Anion-selective porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.540
NIDE3177
Protein of unknown function, contains DnaJ domain; No homology to any previously reported sequences; 12454054, 15170475, 8016869, 9644977.
    
 0.509
NIDE3043
Putative Outer membrane chaperone Skp precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
 
   0.499
NIDE3157
Conserved exported protein of unknown function, putative Porin; Homologs of previously reported genes of unknown function.
  
     0.451
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.