STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3300Homologs of previously reported genes of unknown function. (304 aa)    
Predicted Functional Partners:
NIDE3299
Conserved exported protein of unknown function DUF323; Homologs of previously reported genes of unknown function.
 
    
0.851
NIDE1530
Protein of unknown function, putative protein kinase; No homology to any previously reported sequences; 10627033, 1239947, 12406230, 1835671, 3291115, 7774814, 8733241, 9044280, 9119030.
 
    0.826
NIDE3301
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.764
NIDE3302
Homologs of previously reported genes of unknown function.
       0.700
NIDE3303
Uncharacterized protein; Homologs of previously reported genes of unknown function; 1658595, 2170336, 8626304.
       0.641
NIDE3304
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.635
NIDE3305
Protein of unknown function; No homology to any previously reported sequences.
       0.468
NIDE3306
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.425
NIDE2022
Putative Serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.415
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.