Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3434Putative ABC transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (254 aa)    
Predicted Functional Partners:
NIDE3435
ABC-type transport system, ATPase component; Function of strongly homologous gene; enzyme.
 
 
 0.976
NIDE3436
Homologs of previously reported genes of unknown function.
 
     0.950
NIDE3437
Conserved membrane protein of unknown function, TPR-like; Homologs of previously reported genes of unknown function; 12107146.
 
     0.809
pilA
Type IV pilin PilA; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
     0.788
pilA2
Type IV pilin PilA; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
    0.739
NIDE1279
ABC-type transport system, ATPase component; Function of strongly homologous gene; enzyme.
 
 
 0.606
ybhF
ABC transport system, fused ATPase components; Function of strongly homologous gene; enzyme.
  
 
 0.546
drrA
Daunorubicin resistance ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
  
 
 0.546
NIDE3338
ABC-type transport system, ATP-binding component; Function of strongly homologous gene; transporter.
  
 
 0.546
pilM
Type IV pilus biogenesis protein PilM; Function of strongly homologous gene; structure.
 
     0.510
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.