Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NIDE3569Putative Regulatory protein, cbbQ/nirQ/norQ/gpvN family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (279 aa)    
Predicted Functional Partners:
NIDE3564
Protein of unknown function, contains von Willebrand factor; No homology to any previously reported sequences; 8440408, 9759493.
 
 
 0.957
NIDE3568
Homologs of previously reported genes of unknown function; ; Belongs to the UPF0235 family.
       0.671
NIDE2577
Conserved membrane protein of unknown function, NnrS family; Homologs of previously reported genes of unknown function; 12618453.
 
    0.592
NIDE3571
Protein of unknown function; No homology to any previously reported sequences.
  
    0.542
NIDE3570
Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.523
NIDE3567
Homologs of previously reported genes of unknown function.
       0.511
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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