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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3571Protein of unknown function; No homology to any previously reported sequences. (476 aa)    
Predicted Functional Partners:
NIDE3570
Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.826
NIDE3572
Homologs of previously reported genes of unknown function.
       0.578
NIDE3569
Putative Regulatory protein, cbbQ/nirQ/norQ/gpvN family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
  
 0.558
NIDE3568
Homologs of previously reported genes of unknown function; ; Belongs to the UPF0235 family.
       0.533
NIDE3573
Putative Glutaredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
       0.470
NIDE2341
Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.455
flgD
Flagellar hook capping protein FlgD (fragment); Function of homologous gene experimentally demonstrated in an other organism; structure.
   
   0.428
kamA
L-lysine 2,3-aminomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.411
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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