NIDE3588 protein (Nitrospira defluvii) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

NIDE3588

Homologs of previously reported genes of unknown function. (197 aa)

Predicted Functional Partners:

cheV

0.905

NIDE2654

0.876

NIDE3587

0.842

NIDE3586

0.827

NIDE0805

0.637

NIDE0815

0.637

NIDE3585

0.636

cheA

0.547

cheA-2

0.547

NIDE0542

0.519

Your Current Organism:

Nitrospira defluvii

NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NIDE0542	NIDE0805	NIDE0542	NIDE0805	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.979
NIDE0542	NIDE0815	NIDE0542	NIDE0815	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.978
NIDE0542	NIDE2654	NIDE0542	NIDE2654	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.954
NIDE0542	NIDE3586	NIDE0542	NIDE3586	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.702
NIDE0542	NIDE3587	NIDE0542	NIDE3587	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.762
NIDE0542	NIDE3588	NIDE0542	NIDE3588	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Homologs of previously reported genes of unknown function.	0.519
NIDE0542	cheA	NIDE0542	NIDE2350	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Chemotaxis protein histidine kinase CheA; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.653
NIDE0542	cheA-2	NIDE0542	NIDE2361	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Chemotaxis protein histidine kinase CheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.	0.653
NIDE0542	cheV	NIDE0542	NIDE2351	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Chemotaxis signal transducer CheV; Function of strongly homologous gene; regulator.	0.945
NIDE0805	NIDE0542	NIDE0805	NIDE0542	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	0.979
NIDE0805	NIDE0815	NIDE0805	NIDE0815	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.999
NIDE0805	NIDE2654	NIDE0805	NIDE2654	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.999
NIDE0805	NIDE3585	NIDE0805	NIDE3585	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	0.507
NIDE0805	NIDE3586	NIDE0805	NIDE3586	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.928
NIDE0805	NIDE3587	NIDE0805	NIDE3587	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.961
NIDE0805	NIDE3588	NIDE0805	NIDE3588	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.637
NIDE0805	cheA	NIDE0805	NIDE2350	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Chemotaxis protein histidine kinase CheA; Function of homologous gene experimentally demonstrated in an other organism; enzyme.	0.703
NIDE0805	cheA-2	NIDE0805	NIDE2361	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Chemotaxis protein histidine kinase CheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.	0.703
NIDE0805	cheV	NIDE0805	NIDE2351	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Chemotaxis signal transducer CheV; Function of strongly homologous gene; regulator.	0.978
NIDE0815	NIDE0542	NIDE0815	NIDE0542	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	0.978