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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3638Protein of unknown function, putative ATPase; No homology to any previously reported sequences. (184 aa)    
Predicted Functional Partners:
NIDE2227
Protein of unknown function; No homology to any previously reported sequences.
 
     0.784
NIDE2228
Protein of unknown function; No homology to any previously reported sequences.
 
     0.784
NIDE2234
Conserved protein of unknown function, putative Baseplate assembly protein W (GpW); Homologs of previously reported genes of unknown function; 3520236.
 
     0.784
NIDE2219
Putative Phage tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
     0.783
NIDE2220
Conserved protein of unknown function CHP02241, phage tail region protein; Homologs of previously reported genes of unknown function.
 
     0.783
NIDE2226
Protein of unknown function; No homology to any previously reported sequences.
  
    0.776
NIDE2241
Protein of unknown function; No homology to any previously reported sequences.
  
    0.776
NIDE2235
Homologs of previously reported genes of unknown function.
 
     0.755
NIDE2232
Homologs of previously reported genes of unknown function.
 
     0.745
NIDE2223
Homologs of previously reported genes of unknown function.
 
     0.738
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.