Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3638Protein of unknown function, putative ATPase; No homology to any previously reported sequences. (184 aa)    
Predicted Functional Partners:
NIDE3222
Putative Deacetylase, histone deacetylase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.812
NIDE2219
Putative Phage tail sheath protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
   
 0.788
NIDE2234
Conserved protein of unknown function, putative Baseplate assembly protein W (GpW); Homologs of previously reported genes of unknown function; 3520236.
 
   
 0.786
NIDE2220
Conserved protein of unknown function CHP02241, phage tail region protein; Homologs of previously reported genes of unknown function.
 
     0.784
NIDE2227
Protein of unknown function; No homology to any previously reported sequences.
 
     0.784
NIDE2228
Protein of unknown function; No homology to any previously reported sequences.
 
     0.784
NIDE2226
Protein of unknown function; No homology to any previously reported sequences.
  
    0.775
NIDE2241
Protein of unknown function; No homology to any previously reported sequences.
  
    0.775
NIDE3177
Protein of unknown function, contains DnaJ domain; No homology to any previously reported sequences; 12454054, 15170475, 8016869, 9644977.
   
 
 0.762
NIDE2235
Homologs of previously reported genes of unknown function.
 
     0.756
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.